Class SeqIOAdapter

    • Constructor Summary

      Constructors 
      Constructor Description
      SeqIOAdapter()  
    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void addFeatureProperty​(java.lang.Object key, java.lang.Object value)
      Notify the listener of a feature property.
      void addSequenceProperty​(java.lang.Object key, java.lang.Object value)
      Notify the listener of a sequence-wide property.
      void addSymbols​(Alphabet alpha, Symbol[] syms, int start, int length)
      Notify the listener of symbol data.
      void endFeature()
      Mark the end of data associated with one specific feature.
      void endSequence()
      Notify the listener that processing of the sequence is complete.
      void setName​(java.lang.String name)
      Notify the listener that the current sequence is generally known by a particular name.
      void setURI​(java.lang.String uri)
      Notify the listener of a URI identifying the current sequence.
      void startFeature​(Feature.Template templ)
      Notify the listener that a new feature object is starting.
      void startSequence()
      Start the processing of a sequence.
      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait